ctcRbase

Entry Detail

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General Information

Database ID: BRCA00483 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SCYL3 Full Name: SCY1 like pseudokinase 3 Category: mRNA Synonyms: PACE-1|PACE1 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 169849631 End Site(bp): 169894267 Gene Summary: This gene encodes a protein with a kinase domain and four HEAT repeats. The encoded protein interacts with the C-terminal domain of ezrin, an ERM protein, and may play a role in cell adhesion and migration. Alternative splicing results in multiple transcript variants encoding multiple isoforms. [provided by RefSeq, Jun 2012] External Links: Ensembl ID: ENSG00000000457 HGNC ID: HGNC:19285 Entrez Gene: 57147

Expression Profile of SCYL3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-132-3p YES YES YES hsa-miR-183-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-193a-3p YES YES YES hsa-miR-193b-3p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-219a-2-3p YES NO YES hsa-miR-22-3p YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES YES YES hsa-miR-98-5p YES YES YES Display: