Entry Detail



General Information

Database ID:BRCA00507
Cancer Type:breast cancer
Dataset:GSE111842
CTCs/CTM Isolation Method:immunomagnetic FACS



Gene Information

ncRNA Symbol:HLA-F
Full Name:major histocompatibility complex, class I, F
Category:mRNA
Synonyms:CDA12|HLA-5.4|HLA-CDA12|HLAF
Chromosome:chr6
Strand:+
Coordinate:
Start Site(bp):29722775End Site(bp):29738528
Gene Summary:This gene belongs to the HLA class I heavy chain paralogues. It encodes a non-classical heavy chain that forms a heterodimer with a beta-2 microglobulin light chain, with the heavy chain anchored in the membrane. Unlike most other HLA heavy chains, this molecule is localized in the endoplasmic reticulum and Golgi apparatus, with a small amount present at the cell surface in some cell types. It contains a divergent peptide-binding groove, and is thought to bind a restricted subset of peptides for immune presentation. This gene exhibits few polymorphisms. Multiple transcript variants encoding different isoforms have been found for this gene. These variants lack a coding exon found in transcripts from other HLA paralogues due to an altered splice acceptor site, resulting in a shorter cytoplasmic domain. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000204642
HGNC ID:HGNC:4963
Entrez Gene:3134



Expression Profile of HLA-F Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A