ctcRbase

Entry Detail

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General Information

Database ID: BRCA00545 Cancer Type: breast cancer Dataset: GSE86978 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: H3F3A Full Name: H3 histone family member 3A Category: mRNA Synonyms: H3.3A|H3F3 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 226061851 End Site(bp): 226072001 Gene Summary: Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene contains introns and its mRNA is polyadenylated, unlike most histone genes. The protein encoded is a replication-independent member of the histone H3 family. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000163041 HGNC ID: HGNC:4764 Entrez Gene: 3020

Expression Profile of H3F3A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-155-5p YES YES YES hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-329-3p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-340-5p YES YES YES hsa-miR-362-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-377-3p YES YES YES hsa-miR-494-3p YES YES YES hsa-miR-543 YES YES NO hsa-miR-873-5p YES YES YES Display: