ctcRbase

Entry Detail

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General Information

Database ID: BRCA00710 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: USF1 Full Name: upstream transcription factor 1 Category: mRNA Synonyms: FCHL|FCHL1|HYPLIP1|MLTF|MLTFI|UEF|bHLHb11 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 161039251 End Site(bp): 161045977 Gene Summary: This gene encodes a member of the basic helix-loop-helix leucine zipper family, and can function as a cellular transcription factor. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs. This gene has been linked to familial combined hyperlipidemia (FCHL). Alternative splicing of this gene results in multiple transcript variants. A related pseudogene has been defined on chromosome 21. [provided by RefSeq, Feb 2013] External Links: Ensembl ID: ENSG00000158773 HGNC ID: HGNC:12593 Entrez Gene: 7391

Expression Profile of USF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-296-5p YES NO YES hsa-miR-329-3p YES YES NO hsa-miR-338-3p YES YES YES hsa-miR-339-5p YES YES NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-7-5p YES YES NO Display: