Entry Detail



General Information

Database ID:BRCA00793
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:EFNA5
Full Name:ephrin A5
Category:mRNA
Synonyms:AF1|EFL5|EPLG7|GLC1M|LERK7|RAGS
Chromosome:chr5
Strand:-
Coordinate:
Start Site(bp):107376889End Site(bp):107670895
Gene Summary:Ephrin-A5, a member of the ephrin gene family, prevents axon bundling in cocultures of cortical neurons with astrocytes, a model of late stage nervous system development and differentiation. The EPH and EPH-related receptors comprise the largest subfamily of receptor protein-tyrosine kinases and have been implicated in mediating developmental events, particularly in the nervous system. EPH receptors typically have a single kinase domain and an extracellular region containing a Cys-rich domain and 2 fibronectin type III repeats. The ephrin ligands and receptors have been named by the Eph Nomenclature Committee (1997). Based on their structures and sequence relationships, ephrins are divided into the ephrin-A (EFNA) class, which are anchored to the membrane by a glycosylphosphatidylinositol linkage, and the ephrin-B (EFNB) class, which are transmembrane proteins. The Eph family of receptors are similarly divided into 2 groups based on the similarity of their extracellular domain sequences and their affinities for binding ephrin-A and ephrin-B ligands. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000184349
HGNC ID:HGNC:3225
Entrez Gene:1946



Expression Profile of EFNA5 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-101-3p
NO
YES
YES
hsa-miR-130a-3p
NO
YES
YES
hsa-miR-130b-3p
NO
YES
YES
hsa-miR-186-5p
YES
NO
NO
hsa-miR-204-5p
NO
YES
YES
hsa-miR-211-5p
NO
YES
YES
hsa-miR-23a-3p
NO
YES
YES
hsa-miR-23b-3p
NO
YES
YES
hsa-miR-29a-3p
NO
YES
YES
hsa-miR-29b-3p
NO
YES
YES
hsa-miR-29c-3p
NO
YES
YES
hsa-miR-301a-3p
NO
YES
YES
hsa-miR-301b-3p
NO
YES
YES
hsa-miR-454-3p
NO
YES
YES
hsa-miR-488-3p
NO
YES
YES
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