ctcRbase

Entry Detail

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General Information

Database ID: BRCA00794 Cancer Type: breast cancer Dataset: GSE111842 CTCs/CTM Isolation Method: immunomagnetic FACS

Gene Information

ncRNA Symbol: PIGN Full Name: phosphatidylinositol glycan anchor biosynthesis class N Category: mRNA Synonyms: MCAHS|MCAHS1|MCD4|MDC4|PIG-N Chromosome: chr18 Strand: - Coordinate: Start Site(bp): 61905255 End Site(bp): 62187118 Gene Summary: This gene encodes a protein that is involved in glycosylphosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is a glycolipid found on many blood cells and serves to anchor proteins to the cell surface. This protein is expressed in the endoplasmic reticulum and transfers phosphoethanolamine (EtNP) to the first mannose of the GPI anchor. Two alternatively spliced variants, which encode an identical isoform, have been reported. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000197563 HGNC ID: HGNC:8967 Entrez Gene: 23556

Expression Profile of PIGN Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-223-3p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-98-5p YES YES NO Display: