Entry Detail



General Information

Database ID:BRCA01040
Cancer Type:breast cancer
Dataset:GSE51827
CTCs/CTM Isolation Method:CTC-iChip



Gene Information

ncRNA Symbol:HLA-A
Full Name:major histocompatibility complex, class I, A
Category:mRNA
Synonyms:HLAA
Chromosome:chr6
Strand:+
Coordinate:
Start Site(bp):29941260End Site(bp):29945884
Gene Summary:HLA-A belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from the endoplasmic reticulum lumen. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon 1 encodes the leader peptide, exons 2 and 3 encode the alpha1 and alpha2 domains, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region, and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. Hundreds of HLA-A alleles have been described. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000206503
HGNC ID:HGNC:4931
Entrez Gene:3105



Expression Profile of HLA-A Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-148a-3p
YES
YES
NO
hsa-miR-148b-3p
YES
YES
NO
hsa-miR-152-3p
YES
YES
NO
hsa-miR-224-5p
YES
YES
NO
hsa-miR-23a-3p
YES
YES
NO
hsa-miR-23b-3p
YES
YES
NO
hsa-miR-31-5p
YES
YES
NO
hsa-miR-371a-5p
YES
YES
NO
hsa-miR-873-5p
YES
YES
NO
Display: