ctcRbase

Entry Detail

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General Information

Database ID: BRCA01208 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CANX Full Name: calnexin Category: mRNA Synonyms: CNX|IP90|P90 Chromosome: chr5 Strand: + Coordinate: Start Site(bp): 179678628 End Site(bp): 179730925 Gene Summary: This gene encodes a member of the calnexin family of molecular chaperones. The encoded protein is a calcium-binding, endoplasmic reticulum (ER)-associated protein that interacts transiently with newly synthesized N-linked glycoproteins, facilitating protein folding and assembly. It may also play a central role in the quality control of protein folding by retaining incorrectly folded protein subunits within the ER for degradation. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jun 2018] External Links: Ensembl ID: ENSG00000127022 HGNC ID: HGNC:1473 Entrez Gene: 821

Expression Profile of CANX Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES YES hsa-miR-128-3p YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-139-5p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-338-3p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-370-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-431-5p YES YES NO hsa-miR-452-5p YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-483-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-505-3p YES YES YES hsa-miR-655-3p YES NO YES hsa-miR-668-3p YES NO YES Display: