ctcRbase

Entry Detail

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General Information

Database ID: BRCA01210 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RPN2 Full Name: ribophorin II Category: mRNA Synonyms: RIBIIR|RPN-II|RPNII|SWP1 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 37178410 End Site(bp): 37241623 Gene Summary: This gene encodes a type I integral membrane protein found only in the rough endoplasmic reticulum. The encoded protein is part of an N-oligosaccharyl transferase complex that links high mannose oligosaccharides to asparagine residues found in the Asn-X-Ser/Thr consensus motif of nascent polypeptide chains. This protein is similar in sequence to the yeast oligosaccharyl transferase subunit SWP1. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008] External Links: Ensembl ID: ENSG00000118705 HGNC ID: HGNC:10382 Entrez Gene: 6185

Expression Profile of RPN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-219a-2-3p YES NO YES hsa-miR-378a-3p YES YES NO hsa-miR-422a YES YES NO Display: