ctcRbase

Entry Detail

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General Information

Database ID: BRCA01240 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ATXN10 Full Name: ataxin 10 Category: mRNA Synonyms: E46L|HUMEEP|SCA10 Chromosome: chr22 Strand: + Coordinate: Start Site(bp): 45671798 End Site(bp): 45845307 Gene Summary: This gene encodes a protein that may function in neuron survival, neuron differentiation, and neuritogenesis. These roles may be carried out via activation of the mitogen-activated protein kinase cascade. Expansion of an ATTCT repeat from 9-32 copies to 800-4500 copies in an intronic region of this locus has been associated with spinocerebellar ataxia, type 10. Alternatively spliced transcript variants have been described.[provided by RefSeq, Jul 2016] External Links: Ensembl ID: ENSG00000130638 HGNC ID: HGNC:10549 Entrez Gene: 25814

Expression Profile of ATXN10 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-653-5p YES YES NO Display: