ctcRbase

Entry Detail

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General Information

Database ID: BRCA01247 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SSR3 Full Name: signal sequence receptor subunit 3 Category: mRNA Synonyms: TRAPG Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 156540140 End Site(bp): 156555184 Gene Summary: The signal sequence receptor (SSR) is a glycosylated endoplasmic reticulum (ER) membrane receptor associated with protein translocation across the ER membrane. The SSR is comprised of four membrane proteins/subunits: alpha, beta, gamma, and delta. The first two are glycosylated subunits and the latter two are non-glycosylated subunits. This gene encodes the gamma subunit, which is predicted to span the membrane four times. [provided by RefSeq, Aug 2010] External Links: Ensembl ID: ENSG00000114850 HGNC ID: HGNC:11325 Entrez Gene: 6747

Expression Profile of SSR3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1298-5p YES NO YES hsa-miR-137 YES YES NO hsa-miR-140-3p YES NO YES hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-382-5p YES YES YES hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES NO YES hsa-miR-429 YES YES YES hsa-miR-532-3p YES NO YES hsa-miR-543 YES YES NO hsa-miR-599 YES YES NO hsa-miR-9-5p YES YES YES Display: