ctcRbase

Entry Detail

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General Information

Database ID: BRCA01284 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: HSPD1 Full Name: heat shock protein family D (Hsp60) member 1 Category: mRNA Synonyms: CPN60|GROEL|HLD4|HSP-60|HSP60|HSP65|HuCHA60|SPG13 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 197486581 End Site(bp): 197516737 Gene Summary: This gene encodes a member of the chaperonin family. The encoded mitochondrial protein may function as a signaling molecule in the innate immune system. This protein is essential for the folding and assembly of newly imported proteins in the mitochondria. This gene is adjacent to a related family member and the region between the 2 genes functions as a bidirectional promoter. Several pseudogenes have been associated with this gene. Two transcript variants encoding the same protein have been identified for this gene. Mutations associated with this gene cause autosomal recessive spastic paraplegia 13. [provided by RefSeq, Jun 2010] External Links: Ensembl ID: ENSG00000144381 HGNC ID: HGNC:5261 Entrez Gene: 3329

Expression Profile of HSPD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES NO YES hsa-miR-1-3p YES YES YES hsa-miR-206 YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-31-5p YES YES YES hsa-miR-361-5p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-382-5p YES YES YES hsa-miR-488-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-505-3p YES YES YES hsa-miR-613 YES YES YES hsa-miR-760 YES NO YES hsa-miR-802 YES NO YES hsa-miR-873-5p YES YES YES Display: