ctcRbase

Entry Detail

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General Information

Database ID: BRCA09535 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: FBXO28 Full Name: F-box protein 28 Category: mRNA Synonyms: CENP-30|Fbx28 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 224114087 End Site(bp): 224162047 Gene Summary: Members of the F-box protein family, such as FBXO28, are characterized by an approximately 40-amino acid F-box motif. SCF complexes, formed by SKP1 (MIM 601434), cullin (see CUL1; MIM 603134), and F-box proteins, act as protein-ubiquitin ligases. F-box proteins interact with SKP1 through the F box, and they interact with ubiquitination targets through other protein interaction domains (Jin et al., 2004 [PubMed 15520277]).[supplied by OMIM, Mar 2008] External Links: Ensembl ID: ENSG00000143756 HGNC ID: HGNC:29046 Entrez Gene: 23219

Expression Profile of FBXO28 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p NO YES YES hsa-miR-106b-5p NO YES YES hsa-miR-1297 YES NO YES hsa-miR-130a-3p NO YES YES hsa-miR-130b-3p NO YES YES hsa-miR-132-3p YES YES YES hsa-miR-139-5p YES YES YES hsa-miR-145-5p YES YES YES hsa-miR-146a-5p NO YES YES hsa-miR-146b-5p NO YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-17-5p NO YES YES hsa-miR-184 YES YES YES hsa-miR-18a-5p NO YES YES hsa-miR-18b-5p NO YES YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-20a-5p NO YES YES hsa-miR-20b-5p NO YES YES hsa-miR-212-3p YES YES YES hsa-miR-21-5p NO YES YES hsa-miR-218-5p YES YES YES hsa-miR-221-3p NO YES YES hsa-miR-222-3p NO YES YES hsa-miR-223-3p NO YES YES hsa-miR-25-3p YES NO YES hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-29a-3p NO YES YES hsa-miR-29b-3p NO YES YES hsa-miR-29c-3p NO YES YES hsa-miR-301a-3p NO YES YES hsa-miR-301b-3p NO YES YES hsa-miR-30a-5p NO YES YES hsa-miR-30b-5p NO YES YES hsa-miR-30c-5p NO YES YES hsa-miR-30d-5p NO YES YES hsa-miR-30e-5p NO YES YES hsa-miR-320a YES NO YES hsa-miR-320b YES NO YES hsa-miR-320c YES NO YES hsa-miR-320d YES NO YES hsa-miR-32-5p YES NO YES hsa-miR-335-5p YES YES YES hsa-miR-339-5p NO YES YES hsa-miR-363-3p YES NO YES hsa-miR-367-3p YES NO YES hsa-miR-370-3p NO YES YES hsa-miR-376c-3p NO YES YES hsa-miR-382-5p YES YES NO hsa-miR-448 YES YES YES hsa-miR-454-3p NO YES YES hsa-miR-495-3p YES YES YES hsa-miR-496 YES YES NO hsa-miR-519d-3p NO YES YES hsa-miR-590-5p NO YES YES hsa-miR-7-5p NO YES YES hsa-miR-874-3p NO YES YES hsa-miR-92a-3p YES NO YES hsa-miR-92b-3p YES NO YES hsa-miR-93-5p NO YES YES Display: