ctcRbase

Entry Detail

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General Information

Database ID: BRCA19425 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: RAB11FIP1 Full Name: RAB11 family interacting protein 1 Category: mRNA Synonyms: NOEL1A|RCP|rab11-FIP1 Chromosome: chr8 Strand: - Coordinate: Start Site(bp): 37858618 End Site(bp): 37899467 Gene Summary: This gene encodes one of the Rab11-family interacting proteins (Rab11-FIPs), which play a role in the Rab-11 mediated recycling of vesicles. The encoded protein may be involved in endocytic sorting, trafficking of proteins including integrin subunits and epidermal growth factor receptor (EGFR), and transport between the recycling endosome and the trans-Golgi network. Alternative splicing results in multiple transcript variants. A pseudogene is described on the X chromosome. [provided by RefSeq, Dec 2013] External Links: Ensembl ID: ENSG00000156675 HGNC ID: HGNC:30265 Entrez Gene: 80223

Expression Profile of RAB11FIP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-103a-3p YES NO NO hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES NO NO hsa-miR-124-3p YES YES YES hsa-miR-128-3p YES NO YES hsa-miR-1297 YES YES YES hsa-miR-138-5p YES YES NO hsa-miR-139-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-143-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-149-5p YES YES YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-195-5p YES NO YES hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-205-5p YES NO YES hsa-miR-206 YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-214-3p YES NO NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES NO YES hsa-miR-224-5p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-25-3p YES YES NO hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-32-5p YES YES NO hsa-miR-326 YES NO YES hsa-miR-330-5p YES NO YES hsa-miR-363-3p YES YES NO hsa-miR-367-3p YES YES NO hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-424-5p YES NO YES hsa-miR-490-3p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-503-5p YES NO NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-543 YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-613 YES YES YES hsa-miR-92a-3p YES YES NO hsa-miR-92b-3p YES YES NO hsa-miR-93-5p YES YES YES Display: