ctcRbase

Entry Detail

---



General Information

Database ID: BRCA23692 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TPBG Full Name: trophoblast glycoprotein Category: mRNA Synonyms: 5T4|5T4AG|M6P1|WAIF1 Chromosome: chr6 Strand: + Coordinate: Start Site(bp): 82363206 End Site(bp): 82370828 Gene Summary: This gene encodes a leucine-rich transmembrane glycoprotein that may be involved in cell adhesion. The encoded protein is an oncofetal antigen that is specific to trophoblast cells. In adults this protein is highly expressed in many tumor cells and is associated with poor clinical outcome in numerous cancers. Alternate splicing in the 5' UTR results in multiple transcript variants that encode the same protein. [provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000146242 HGNC ID: HGNC:12004 Entrez Gene: 7162

Expression Profile of TPBG Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-217 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-653-5p YES YES NO Display: