ctcRbase

Entry Detail

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General Information

Database ID: BRCA24647 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CSNK1G1 Full Name: casein kinase 1 gamma 1 Category: mRNA Synonyms: CK1gamma1 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 64165517 End Site(bp): 64356259 Gene Summary: This gene encodes a member of the casein kinase I gene family. This family is comprised of serine/threonine kinases that phosphorylate acidic proteins such as caseins. The encoded kinase plays a role in cell cycle checkpoint arrest in response to stalled replication forks by phosphorylating Claspin. A mutation in this gene may be associated with non-syndromic early-onset epilepsy (NSEOE). [provided by RefSeq, Jul 2016] External Links: Ensembl ID: ENSG00000169118 HGNC ID: HGNC:2454 Entrez Gene: 53944

Expression Profile of CSNK1G1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-1224-5p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-139-5p YES NO YES hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-24-3p YES NO YES hsa-miR-26a-5p YES YES YES hsa-miR-26b-5p YES YES YES hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-28-5p YES NO YES hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-326 YES NO YES hsa-miR-330-5p YES NO YES hsa-miR-362-3p YES NO NO hsa-miR-369-3p YES NO NO hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES NO YES hsa-miR-411-5p YES NO YES hsa-miR-425-5p YES NO YES hsa-miR-454-3p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-499a-5p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-599 YES YES NO hsa-miR-665 YES NO YES hsa-miR-708-5p YES NO YES hsa-miR-758-3p YES NO YES hsa-miR-873-5p YES NO YES hsa-miR-93-5p YES YES YES Display: