ctcRbase

Entry Detail

---



General Information

Database ID: BRCA25364 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: GDPD1 Full Name: glycerophosphodiester phosphodiesterase domain containing 1 Category: mRNA Synonyms: GDE4 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 59220467 End Site(bp): 59275967 Gene Summary: This gene encodes a member of the glycerophosphodiester phosphodiesterase family of enzymes that catalyze the hydrolysis of deacylated glycerophospholipids to glycerol phosphate and alcohol. The encoded protein is localized to the cytoplasm and concentrates near the perinuclear region. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000153982 HGNC ID: HGNC:20883 Entrez Gene: 284161

Expression Profile of GDPD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-154-5p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-98-5p YES YES YES Display: