ctcRbase

Entry Detail

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General Information

Database ID: BRCA25978 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SALL4 Full Name: spalt like transcription factor 4 Category: mRNA Synonyms: DRRS|HSAL4|ZNF797 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 51782331 End Site(bp): 51802520 Gene Summary: This gene encodes a zinc finger transcription factor thought to play a role in the development of abducens motor neurons. Defects in this gene are a cause of Duane-radial ray syndrome (DRRS). Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000101115 HGNC ID: HGNC:15924 Entrez Gene: 57167

Expression Profile of SALL4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES YES hsa-miR-107 YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-143-3p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-330-3p YES NO YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-448 YES YES NO hsa-miR-497-5p YES YES YES Display: