ctcRbase

Entry Detail

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General Information

Database ID: BRCA25992 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TOX3 Full Name: TOX high mobility group box family member 3 Category: mRNA Synonyms: CAGF9|TNRC9 Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 52438005 End Site(bp): 52547802 Gene Summary: The protein encoded by this gene contains an HMG-box, indicating that it may be involved in bending and unwinding of DNA and alteration of chromatin structure. The C-terminus of the encoded protein is glutamine-rich due to CAG repeats in the coding sequence. A minor allele of this gene has been implicated in an elevated risk of breast cancer. Two transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Apr 2009] External Links: Ensembl ID: ENSG00000103460 HGNC ID: HGNC:11972 Entrez Gene: 27324

Expression Profile of TOX3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 NO YES YES hsa-miR-185-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-196a-5p YES YES YES hsa-miR-196b-5p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-23a-3p NO YES YES hsa-miR-23b-3p NO YES YES hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO Display: