ctcRbase

Entry Detail

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General Information

Database ID: BRCA26956 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SPOCK1 Full Name: SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 Category: mRNA Synonyms: SPOCK|TESTICAN|TIC1 Chromosome: chr5 Strand: - Coordinate: Start Site(bp): 136975298 End Site(bp): 137598379 Gene Summary: This gene encodes the protein core of a seminal plasma proteoglycan containing chondroitin- and heparan-sulfate chains. The protein's function is unknown, although similarity to thyropin-type cysteine protease-inhibitors suggests its function may be related to protease inhibition. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000152377 HGNC ID: HGNC:11251 Entrez Gene: 6695

Expression Profile of SPOCK1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-1197 YES NO YES hsa-miR-129-2-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-139-5p YES YES YES hsa-miR-1-3p YES YES NO hsa-miR-140-5p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-147a YES NO NO hsa-miR-155-5p YES YES YES hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-193a-5p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-206 YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-22-3p YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-31-5p YES YES NO hsa-miR-326 YES YES YES hsa-miR-330-5p YES YES YES hsa-miR-335-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-501-3p YES NO YES hsa-miR-502-3p YES NO YES hsa-miR-543 YES YES NO hsa-miR-582-5p YES NO YES hsa-miR-590-5p YES YES NO hsa-miR-599 YES YES NO hsa-miR-613 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-873-5p YES YES NO Display: