Entry Detail



General Information

Database ID:BRCA27298
Cancer Type:breast cancer
Dataset:GSE109761
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:SGMS2
Full Name:sphingomyelin synthase 2
Category:mRNA
Synonyms:SMS2
Chromosome:chr4
Strand:+
Coordinate:
Start Site(bp):107824563End Site(bp):107915047
Gene Summary:Sphingomyelin, a major component of cell and Golgi membranes, is made by the transfer of phosphocholine from phosphatidylcholine onto ceramide, with diacylglycerol as a side product. The protein encoded by this gene is an enzyme that catalyzes this reaction primarily at the cell membrane. The synthesis is reversible, and this enzyme can catalyze the reaction in either direction. The encoded protein is required for cell growth. Three transcript variants encoding the same protein have been found for this gene. There is evidence for more variants, but the full-length nature of their transcripts has not been determined.[provided by RefSeq, Oct 2008]
External Links:
Ensembl ID:ENSG00000164023
HGNC ID:HGNC:28395
Entrez Gene:166929



Expression Profile of SGMS2 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-101-3p
NO
YES
YES
hsa-miR-103a-3p
NO
YES
YES
hsa-miR-107
NO
YES
YES
hsa-miR-124-3p
NO
YES
YES
hsa-miR-133a-3p
YES
YES
YES
hsa-miR-133b
YES
YES
YES
hsa-miR-153-3p
NO
YES
YES
hsa-miR-182-5p
NO
YES
YES
hsa-miR-186-5p
YES
YES
NO
hsa-miR-19a-3p
NO
YES
YES
hsa-miR-19b-3p
NO
YES
YES
hsa-miR-223-3p
YES
YES
YES
hsa-miR-29a-3p
NO
YES
YES
hsa-miR-29b-3p
NO
YES
YES
hsa-miR-29c-3p
NO
YES
YES
hsa-miR-335-5p
NO
YES
YES
hsa-miR-342-3p
NO
YES
YES
hsa-miR-9-5p
YES
YES
YES
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