ctcRbase

Entry Detail

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General Information

Database ID: BRCA27521 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: CMTM4 Full Name: CKLF like MARVEL transmembrane domain containing 4 Category: mRNA Synonyms: CKLFSF4 Chromosome: chr16 Strand: - Coordinate: Start Site(bp): 66614750 End Site(bp): 66696707 Gene Summary: This gene belongs to the chemokine-like factor gene superfamily, a novel family that is similar to the chemokine and the transmembrane 4 superfamilies of signaling molecules. This gene is one of several chemokine-like factor genes located in a cluster on chromosome 16. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000183723 HGNC ID: HGNC:19175 Entrez Gene: 146223

Expression Profile of CMTM4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO NO hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES NO YES hsa-miR-107 YES NO NO hsa-miR-1197 YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-125a-5p YES YES NO hsa-miR-125b-5p YES YES NO hsa-miR-140-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-15a-5p YES NO NO hsa-miR-15b-5p YES NO NO hsa-miR-16-5p YES NO NO hsa-miR-17-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-187-3p YES YES NO hsa-miR-195-5p YES NO NO hsa-miR-200a-3p YES YES NO hsa-miR-205-5p YES YES NO hsa-miR-20a-5p YES NO YES hsa-miR-20b-5p YES NO YES hsa-miR-216a-5p YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-224-5p YES YES NO hsa-miR-24-3p YES NO YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES NO YES hsa-miR-31-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-324-5p YES YES NO hsa-miR-328-3p YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-361-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES NO YES hsa-miR-421 YES NO YES hsa-miR-424-5p YES NO NO hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES YES hsa-miR-485-5p YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-497-5p YES NO NO hsa-miR-503-5p YES NO NO hsa-miR-519d-3p YES NO YES hsa-miR-520f-3p YES NO YES hsa-miR-599 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-653-5p YES YES NO hsa-miR-655-3p YES NO YES hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES NO YES Display: