ctcRbase

Entry Detail

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General Information

Database ID: BRCA28569 Cancer Type: breast cancer Dataset: GSE67939 CTCs/CTM Isolation Method: Cluster-Chip

Gene Information

ncRNA Symbol: LMO2 Full Name: LIM domain only 2 Category: mRNA Synonyms: LMO-2|RBTN2|RBTNL1|RHOM2|TTG2 Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 33858576 End Site(bp): 33892289 Gene Summary: LMO2 encodes a cysteine-rich, two LIM-domain protein that is required for yolk sac erythropoiesis. The LMO2 protein has a central and crucial role in hematopoietic development and is highly conserved. The LMO2 transcription start site is located approximately 25 kb downstream from the 11p13 T-cell translocation cluster (11p13 ttc), where a number T-cell acute lymphoblastic leukemia-specific translocations occur. Alternative splicing results in multiple transcript variants encoding different isoforms.[provided by RefSeq, Nov 2008] External Links: Ensembl ID: ENSG00000135363 HGNC ID: HGNC:6642 Entrez Gene: 4005

Expression Profile of LMO2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-132-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-223-3p YES YES YES hsa-miR-25-3p YES YES YES hsa-miR-32-5p YES YES YES hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: