ctcRbase

Entry Detail

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General Information

Database ID: BRCA29350 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RAI1 Full Name: retinoic acid induced 1 Category: mRNA Synonyms: SMCR|SMS Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 17681473 End Site(bp): 17811453 Gene Summary: This gene is located within the Smith-Magenis syndrome region on chromosome 17. It is highly similar to its mouse counterpart and is expressed at high levels mainly in neuronal tissues. The protein encoded by this gene includes a polymorphic polyglutamine tract in the N-terminal domain. Expression of the mouse counterpart in neurons is induced by retinoic acid. This gene is associated with both the severity of the phenotype and the response to medication in schizophrenic patients. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000108557 HGNC ID: HGNC:9834 Entrez Gene: 10743

Expression Profile of RAI1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-141-3p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-184 YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-369-3p YES NO YES hsa-miR-374a-5p YES YES YES hsa-miR-374b-5p YES YES YES hsa-miR-410-3p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-655-3p YES NO YES Display: