ctcRbase

Entry Detail

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General Information

Database ID: BRCA29430 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ZNF189 Full Name: zinc finger protein 189 Category: mRNA Synonyms: - Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 101398873 End Site(bp): 101410660 Gene Summary: Kruppel-like zinc finger proteins such as ZNF189 contain a conserved stretch of 7 amino acids that connects a variable number of DNA-binding zinc finger repeats of the cys(2)his(2) (C2H2) type (summarized by Odeberg et al., 1998 [PubMed 9653648]). Approximately 30% of human Kruppel-like zinc finger proteins contain an N-terminal Kruppel-associated box (KRAB) domain. The KRAB domain consists of approximately 75 amino acids that may be subdivided into an A box, which is present in every KRAB domain and is essential for transcriptional repression, and a B box, which is not always present.[supplied by OMIM, May 2010] External Links: Ensembl ID: ENSG00000136870 HGNC ID: HGNC:12980 Entrez Gene: 7743

Expression Profile of ZNF189 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES NO hsa-miR-150-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-378a-3p YES YES NO hsa-miR-384 YES YES YES hsa-miR-422a YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-96-5p YES YES NO Display: