ctcRbase

Entry Detail

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General Information

Database ID: BRCA30233 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: RAPGEF1 Full Name: Rap guanine nucleotide exchange factor 1 Category: mRNA Synonyms: C3G|GRF2 Chromosome: chr9 Strand: - Coordinate: Start Site(bp): 131576770 End Site(bp): 131740074 Gene Summary: This gene encodes a human guanine nucleotide exchange factor. It transduces signals from CRK by binding the SH3 domain of CRK, and activating several members of the Ras family of GTPases. This signaling cascade that may be involved in apoptosis, integrin-mediated signal transduction, and cell transformation. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some variants has not been determined. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000107263 HGNC ID: HGNC:4568 Entrez Gene: 2889

Expression Profile of RAPGEF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES NO YES hsa-miR-106b-5p YES NO YES hsa-miR-124-3p YES YES YES hsa-miR-142-5p YES NO YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-17-5p YES NO YES hsa-miR-185-5p YES NO NO hsa-miR-195-5p YES NO YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-20a-5p YES NO YES hsa-miR-20b-5p YES NO YES hsa-miR-219a-5p YES NO YES hsa-miR-329-3p YES YES NO hsa-miR-346 YES NO YES hsa-miR-370-3p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-424-5p YES NO YES hsa-miR-429 YES YES YES hsa-miR-452-5p YES NO YES hsa-miR-495-3p YES YES YES hsa-miR-497-5p YES NO YES hsa-miR-503-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES NO YES hsa-miR-93-5p YES NO YES Display: