ctcRbase

Entry Detail

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General Information

Database ID: BRCA30733 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: GCOM1 Full Name: GRINL1A complex locus 1 Category: mRNA Synonyms: GRINL1A|Gcom2|MYZAP|MYZAP-POLR2M|gcom Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 57591908 End Site(bp): 57714745 Gene Summary: This locus represents naturally occurring readthrough transcription between the neighboring MYZAP (myocardial zonula adherens protein) and POLR2M (polymerase (RNA) II (DNA directed) polypeptide M) genes on chromosome 15. Alternative splicing results in multiple readthrough transcript variants. Readthrough variants may encode proteins that share sequence identity with the upstream gene product or with both the upstream and downstream gene products. Some readthrough transcript variants are also expected to be candidates for nonsense-mediated decay (NMD). [provided by RefSeq, Oct 2013] External Links: Ensembl ID: ENSG00000137878 HGNC ID: HGNC:26424 Entrez Gene: 145781

Expression Profile of GCOM1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-1271-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-137 YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-182-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-96-5p YES YES NO Display: