ctcRbase

Entry Detail

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General Information

Database ID: BRCA31054 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SPOCK2 Full Name: SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 Category: mRNA Synonyms: testican-2 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 72059035 End Site(bp): 72089032 Gene Summary: This gene encodes a protein which binds with glycosaminoglycans to form part of the extracellular matrix. The protein contains thyroglobulin type-1, follistatin-like, and calcium-binding domains, and has glycosaminoglycan attachment sites in the acidic C-terminal region. Three alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Oct 2011] External Links: Ensembl ID: ENSG00000107742 HGNC ID: HGNC:13564 Entrez Gene: 9806

Expression Profile of SPOCK2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES NO YES hsa-miR-137 YES NO YES hsa-miR-25-3p YES YES YES hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-32-5p YES YES YES hsa-miR-329-3p YES NO NO hsa-miR-362-3p YES NO NO hsa-miR-363-3p YES YES YES hsa-miR-367-3p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-92a-3p YES YES YES hsa-miR-92b-3p YES YES YES Display: