ctcRbase

Entry Detail

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General Information

Database ID: BRCA32232 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SYNGR3 Full Name: synaptogyrin 3 Category: mRNA Synonyms: - Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 1989660 End Site(bp): 1994275 Gene Summary: This gene encodes an integral membrane protein. The exact function of this protein is unclear, but studies of a similar murine protein suggest that it is a synaptic vesicle protein that also interacts with the dopamine transporter. The gene product belongs to the synaptogyrin gene family. [provided by RefSeq, Dec 2010] External Links: Ensembl ID: ENSG00000127561 HGNC ID: HGNC:11501 Entrez Gene: 9143

Expression Profile of SYNGR3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-185-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-216b-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-300 YES YES YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-668-3p YES NO YES Display: