ctcRbase

Entry Detail

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General Information

Database ID: BRCA34156 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ATRN Full Name: attractin Category: mRNA Synonyms: DPPT-L|MGCA Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 3471040 End Site(bp): 3651122 Gene Summary: This gene encodes both membrane-bound and secreted protein isoforms. A membrane-bound isoform exhibits sequence similarity with the mouse mahogany protein, a receptor involved in controlling obesity. A secreted isoform is involved in the initial immune cell clustering during inflammatory responses that may regulate the chemotactic activity of chemokines. [provided by RefSeq, Apr 2016] External Links: Ensembl ID: ENSG00000088812 HGNC ID: HGNC:885 Entrez Gene: 8455

Expression Profile of ATRN Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-130a-3p YES NO YES hsa-miR-130b-3p YES NO YES hsa-miR-147a YES NO NO hsa-miR-183-5p YES YES YES hsa-miR-208a-3p YES NO YES hsa-miR-208b-3p YES NO YES hsa-miR-217 YES NO YES hsa-miR-218-5p YES YES YES hsa-miR-223-3p YES YES NO hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-300 YES YES YES hsa-miR-301a-3p YES NO YES hsa-miR-301b-3p YES NO YES hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-338-3p YES YES NO hsa-miR-370-3p YES NO YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-454-3p YES NO YES hsa-miR-485-5p YES NO YES hsa-miR-495-3p YES NO YES hsa-miR-499a-5p YES YES YES hsa-miR-543 YES NO YES Display: