ctcRbase

Entry Detail

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General Information

Database ID: BRCA34293 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: PRTG Full Name: protogenin Category: mRNA Synonyms: IGDCC5 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 55611546 End Site(bp): 55743090 Gene Summary: This gene encodes a member of the immunoglobulin superfamily. The encoded transmembrane protein has been associated with the development of various tissues, especially neurogenesis. It has been suggested that this gene may be associated with attention deficit hyperactivity disorder (ADHD). [provided by RefSeq, Nov 2014] External Links: Ensembl ID: ENSG00000166450 HGNC ID: HGNC:26373 Entrez Gene: 283659

Expression Profile of PRTG Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-1271-5p NO YES YES hsa-miR-137 NO YES YES hsa-miR-141-3p NO YES YES hsa-miR-181a-5p YES NO YES hsa-miR-181b-5p YES NO YES hsa-miR-181c-5p YES NO YES hsa-miR-181d-5p YES NO YES hsa-miR-193a-5p YES NO YES hsa-miR-199a-5p YES NO YES hsa-miR-199b-5p YES NO YES hsa-miR-200a-3p NO YES YES hsa-miR-200b-3p NO YES YES hsa-miR-200c-3p NO YES YES hsa-miR-204-5p YES NO YES hsa-miR-211-5p YES NO YES hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-323a-3p YES NO YES hsa-miR-377-3p YES NO YES hsa-miR-429 NO YES YES hsa-miR-494-3p YES NO YES hsa-miR-543 YES NO YES hsa-miR-9-5p NO YES YES hsa-miR-96-5p NO YES YES hsa-miR-98-5p YES NO YES Display: