ctcRbase

Entry Detail

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General Information

Database ID: BRCA34328 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TRRAP Full Name: transformation/transcription domain associated protein Category: mRNA Synonyms: PAF350/400|PAF400|STAF40|TR-AP|Tra1 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 98877933 End Site(bp): 99013243 Gene Summary: This gene encodes a large multidomain protein of the phosphoinositide 3-kinase-related kinases (PIKK) family. The encoded protein is a common component of many histone acetyltransferase (HAT) complexes and plays a role in transcription and DNA repair by recruiting HAT complexes to chromatin. Deregulation of this gene may play a role in several types of cancer including glioblastoma multiforme. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011] External Links: Ensembl ID: ENSG00000196367 HGNC ID: HGNC:12347 Entrez Gene: 8295

Expression Profile of TRRAP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-340-5p NO YES YES hsa-miR-371a-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-488-3p YES YES NO hsa-miR-543 YES YES NO Display: