ctcRbase

Entry Detail

---



General Information

Database ID: BRCA39042 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: C20orf194 Full Name: chromosome 20 open reading frame 194 Category: mRNA Synonyms: - Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 3249305 End Site(bp): 3407625 Gene Summary: This gene encodes an uncharacterized protein with a C-terminal coiled-coil region. The gene is located on chromosome 20p13 in a 1.8 Mb region linked to a spinocerebellar ataxia phenotype, but this gene does not appear to be a disease candidate. [provided by RefSeq, Dec 2011] External Links: Ensembl ID: ENSG00000088854 HGNC ID: HGNC:17721 Entrez Gene: 25943

Expression Profile of C20orf194 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-100-5p YES YES NO hsa-miR-101-3p YES NO YES hsa-miR-124-3p YES NO YES hsa-miR-1271-5p YES YES YES hsa-miR-128-3p YES NO YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-142-3p YES YES YES hsa-miR-144-3p YES NO YES hsa-miR-182-5p YES NO YES hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-379-5p YES YES NO hsa-miR-383-5p YES YES NO hsa-miR-455-5p YES NO YES hsa-miR-506-3p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-96-5p YES YES YES hsa-miR-98-5p YES NO YES hsa-miR-99a-5p YES YES NO hsa-miR-99b-5p YES YES NO Display: