ctcRbase

Entry Detail

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General Information

Database ID: BRCA40596 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: ATG2B Full Name: autophagy related 2B Category: mRNA Synonyms: C14orf103 Chromosome: chr14 Strand: - Coordinate: Start Site(bp): 96279202 End Site(bp): 96363870 Gene Summary: This gene encodes a protein required for autophagy. The encoded protein is involved in autophagosome formation. A germline duplication of a region that includes this gene is associated with predisposition to myeloid malignancies. [provided by RefSeq, Jul 2016] External Links: Ensembl ID: ENSG00000066739 HGNC ID: HGNC:20187 Entrez Gene: 55102

Expression Profile of ATG2B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-1298-5p YES NO YES hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-137 YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-143-3p YES NO YES hsa-miR-154-5p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES NO YES hsa-miR-181b-5p YES NO YES hsa-miR-181c-5p YES NO YES hsa-miR-181d-5p YES NO YES hsa-miR-186-5p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-22-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-296-5p YES NO YES hsa-miR-300 YES YES NO hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-375 YES NO YES hsa-miR-381-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-454-3p YES YES YES hsa-miR-486-5p YES YES NO hsa-miR-496 YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-93-5p YES YES YES Display: