ctcRbase

Entry Detail

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General Information

Database ID: BRCA40688 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: HS6ST1 Full Name: heparan sulfate 6-O-sulfotransferase 1 Category: mRNA Synonyms: HH15|HS6ST Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 128236716 End Site(bp): 128318577 Gene Summary: The protein encoded by this gene is a member of the heparan sulfate biosynthetic enzyme family. Heparan sulfate biosynthetic enzymes are key components in generating a myriad of distinct heparan sulfate fine structures that carry out multiple biological activities. This enzyme is a type II integral membrane protein and is responsible for 6-O-sulfation of heparan sulfate. This enzyme does not share significant sequence similarity with other known sulfotransferases. A pseudogene located on chromosome 1 has been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000136720 HGNC ID: HGNC:5201 Entrez Gene: 9394

Expression Profile of HS6ST1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES YES hsa-miR-1297 YES NO YES hsa-miR-1298-5p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-26a-5p YES NO YES hsa-miR-26b-5p YES NO YES hsa-miR-421 YES YES NO hsa-miR-543 YES YES YES Display: