Entry Detail



General Information

Database ID:BRCA42192
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:CTDP1
Full Name:CTD phosphatase subunit 1
Category:mRNA
Synonyms:CCFDN|FCP1
Chromosome:chr18
Strand:+
Coordinate:
Start Site(bp):79679801End Site(bp):79756623
Gene Summary:This gene encodes a protein which interacts with the carboxy-terminus of the RAP74 subunit of transcription initiation factor TFIIF, and functions as a phosphatase that processively dephosphorylates the C-terminus of POLR2A (a subunit of RNA polymerase II), making it available for initiation of gene expression. Mutations in this gene are associated with congenital cataracts, facial dysmorphism and neuropathy syndrome (CCFDN). Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Feb 2011]
External Links:
Ensembl ID:ENSG00000060069
HGNC ID:HGNC:2498
Entrez Gene:9150



Expression Profile of CTDP1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-370-3p
YES
YES
NO
hsa-miR-378a-3p
YES
NO
YES
hsa-miR-411-5p
YES
YES
YES
hsa-miR-422a
YES
NO
YES
hsa-miR-486-5p
YES
YES
NO
hsa-miR-503-5p
YES
YES
NO
hsa-miR-876-5p
YES
YES
NO
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