ctcRbase

Entry Detail

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General Information

Database ID: BRCA42816 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: EFEMP1 Full Name: EGF containing fibulin extracellular matrix protein 1 Category: mRNA Synonyms: DHRD|DRAD|FBLN3|FBNL|FIBL-3|MLVT|MTLV|S1-5 Chromosome: chr2 Strand: - Coordinate: Start Site(bp): 55865967 End Site(bp): 55924139 Gene Summary: This gene encodes a member of the fibulin family of extracellular matrix glycoproteins. Like all members of this family, the encoded protein contains tandemly repeated epidermal growth factor-like repeats followed by a C-terminus fibulin-type domain. This gene is upregulated in malignant gliomas and may play a role in the aggressive nature of these tumors. Mutations in this gene are associated with Doyne honeycomb retinal dystrophy. Alternatively spliced transcript variants that encode the same protein have been described.[provided by RefSeq, Nov 2009] External Links: Ensembl ID: ENSG00000115380 HGNC ID: HGNC:3218 Entrez Gene: 2202

Expression Profile of EFEMP1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-144-3p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-192-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-215-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-28-3p YES NO YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-365a-3p YES YES YES hsa-miR-520f-3p YES NO YES hsa-miR-876-5p YES YES NO hsa-miR-9-5p YES YES YES Display: