ctcRbase

Entry Detail

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General Information

Database ID: BRCA43093 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: HOXC13 Full Name: homeobox C13 Category: mRNA Synonyms: ECTD9|HOX3|HOX3G Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 53938765 End Site(bp): 53946544 Gene Summary: This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, which are located on different chromosomes and consist of 9 to 11 genes arranged in tandem. This gene is one of several homeobox HOXC genes located in a cluster on chromosome 12. The product of this gene may play a role in the development of hair, nail, and filiform papilla. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000123364 HGNC ID: HGNC:5125 Entrez Gene: 3229

Expression Profile of HOXC13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-122-5p YES YES NO hsa-miR-129-5p YES YES YES hsa-miR-141-3p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-452-5p YES NO YES hsa-miR-494-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-543 YES YES NO hsa-miR-874-3p YES YES NO hsa-miR-876-5p YES YES YES Display: