ctcRbase

Entry Detail

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General Information

Database ID: BRCA43375 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: CHRNA5 Full Name: cholinergic receptor nicotinic alpha 5 subunit Category: mRNA Synonyms: LNCR2 Chromosome: chr15 Strand: + Coordinate: Start Site(bp): 78565520 End Site(bp): 78595269 Gene Summary: The protein encoded by this gene is a nicotinic acetylcholine receptor subunit and a member of a superfamily of ligand-gated ion channels that mediate fast signal transmission at synapses. These receptors are thought to be heteropentamers composed of separate but similar subunits. Defects in this gene have been linked to susceptibility to lung cancer type 2 (LNCR2).[provided by RefSeq, Jun 2010] External Links: Ensembl ID: ENSG00000169684 HGNC ID: HGNC:1959 Entrez Gene: 1138

Expression Profile of CHRNA5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-107 YES NO NO hsa-miR-1297 YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-340-5p NO YES YES hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-494-3p NO YES YES hsa-miR-497-5p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-656-3p YES NO NO hsa-miR-873-5p NO YES YES hsa-miR-93-5p YES YES NO Display: