ctcRbase

Entry Detail

---



General Information

Database ID: BRCA43955 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SNPH Full Name: syntaphilin Category: mRNA Synonyms: - Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 1266316 End Site(bp): 1309328 Gene Summary: Syntaxin-1, synaptobrevin/VAMP, and SNAP25 interact to form the SNARE complex, which is required for synaptic vesicle docking and fusion. The protein encoded by this gene is membrane-associated and inhibits SNARE complex formation by binding free syntaxin-1. Expression of this gene appears to be brain-specific. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2015] External Links: Ensembl ID: ENSG00000101298 HGNC ID: HGNC:15931 Entrez Gene: 9751

Expression Profile of SNPH Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-19a-3p YES NO YES hsa-miR-19b-3p YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-330-3p YES NO YES hsa-miR-454-3p YES YES YES Display: