ctcRbase

Entry Detail

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General Information

Database ID: BRCA45591 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: ZSCAN25 Full Name: zinc finger and SCAN domain containing 25 Category: mRNA Synonyms: ZNF498 Chromosome: chr7 Strand: + Coordinate: Start Site(bp): 99616946 End Site(bp): 99632407 Gene Summary: This gene encodes a protein that bears some similarity to zinc finger proteins, which are involved in DNA binding and protein-protein interactions. Multiple alternatively spliced transcript variants have been identified, but the full-length nature for most of them has not been determined. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000197037 HGNC ID: HGNC:21961 Entrez Gene: 221785

Expression Profile of ZSCAN25 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-124-3p YES YES NO hsa-miR-1271-5p YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-143-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-17-5p YES YES YES hsa-miR-183-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-216a-5p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-29a-3p YES YES YES hsa-miR-29b-3p YES YES YES hsa-miR-29c-3p YES YES YES hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-31-5p YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-365a-3p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-503-5p YES NO NO hsa-miR-506-3p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-551a YES YES NO hsa-miR-551b-3p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-92a-3p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES YES YES hsa-miR-98-5p YES YES NO Display: