ctcRbase

Entry Detail

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General Information

Database ID: BRCA45887 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SEMA4G Full Name: semaphorin 4G Category: mRNA Synonyms: - Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 100969518 End Site(bp): 100985871 Gene Summary: Semaphorins are a large family of conserved secreted and membrane associated proteins which possess a semaphorin (Sema) domain and a PSI domain (found in plexins, semaphorins and integrins) in the N-terminal extracellular portion. Based on sequence and structural similarities, semaphorins are put into eight classes: invertebrates contain classes 1 and 2, viruses have class V, and vertebrates contain classes 3-7. Semaphorins serve as axon guidance ligands via multimeric receptor complexes, some (if not all) containing plexin proteins. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2011] External Links: Ensembl ID: ENSG00000095539 HGNC ID: HGNC:10735 Entrez Gene: 57715

Expression Profile of SEMA4G Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES YES hsa-let-7b-5p YES YES YES hsa-let-7c-5p YES YES YES hsa-let-7d-5p YES YES YES hsa-let-7e-5p YES YES YES hsa-let-7f-5p YES YES YES hsa-let-7g-5p YES YES YES hsa-let-7i-5p YES YES YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-1197 YES NO YES hsa-miR-132-3p YES YES YES hsa-miR-149-5p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-193a-3p YES YES NO hsa-miR-193b-3p YES YES NO hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-212-3p YES YES YES hsa-miR-219a-5p YES YES YES hsa-miR-24-3p YES YES YES hsa-miR-28-5p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-331-3p YES NO YES hsa-miR-448 YES NO YES hsa-miR-485-5p YES YES NO hsa-miR-519d-3p YES YES YES hsa-miR-708-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-98-5p YES YES YES Display: