Entry Detail



General Information

Database ID:BRCA48798
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:PTPRB
Full Name:protein tyrosine phosphatase, receptor type B
Category:mRNA
Synonyms:HPTP-BETA|HPTPB|PTPB|R-PTP-BETA|VEPTP
Chromosome:chr12
Strand:-
Coordinate:
Start Site(bp):70515866End Site(bp):70637440
Gene Summary:The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP contains an extracellular domain, a single transmembrane segment and one intracytoplasmic catalytic domain, thus belongs to receptor type PTP. The extracellular region of this PTP is composed of multiple fibronectin type_III repeats, which was shown to interact with neuronal receptor and cell adhesion molecules, such as contactin and tenascin C. This protein was also found to interact with sodium channels, and thus may regulate sodium channels by altering tyrosine phosphorylation status. The functions of the interaction partners of this protein implicate the roles of this PTP in cell adhesion, neurite growth, and neuronal differentiation. Alternate transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2011]
External Links:
Ensembl ID:ENSG00000127329
HGNC ID:HGNC:9665
Entrez Gene:5787



Expression Profile of PTPRB Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-128-3p
YES
YES
YES
hsa-miR-142-5p
YES
NO
YES
hsa-miR-320a
YES
YES
YES
hsa-miR-320b
YES
YES
YES
hsa-miR-320c
YES
YES
YES
hsa-miR-320d
YES
YES
YES
hsa-miR-340-5p
YES
YES
YES
hsa-miR-376c-3p
YES
NO
YES
hsa-miR-377-3p
YES
YES
YES
hsa-miR-410-3p
YES
NO
YES
hsa-miR-421
YES
YES
YES
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