Entry Detail



General Information

Database ID:BRCA50250
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:COL6A1
Full Name:collagen type VI alpha 1 chain
Category:mRNA
Synonyms:BTHLM1|OPLL|UCHMD1
Chromosome:chr21
Strand:+
Coordinate:
Start Site(bp):45981737End Site(bp):46005050
Gene Summary:The collagens are a superfamily of proteins that play a role in maintaining the integrity of various tissues. Collagens are extracellular matrix proteins and have a triple-helical domain as their common structural element. Collagen VI is a major structural component of microfibrils. The basic structural unit of collagen VI is a heterotrimer of the alpha1(VI), alpha2(VI), and alpha3(VI) chains. The alpha2(VI) and alpha3(VI) chains are encoded by the COL6A2 and COL6A3 genes, respectively. The protein encoded by this gene is the alpha 1 subunit of type VI collagen (alpha1(VI) chain). Mutations in the genes that code for the collagen VI subunits result in the autosomal dominant disorder, Bethlem myopathy. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000142156
HGNC ID:HGNC:2211
Entrez Gene:1291



Expression Profile of COL6A1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-23a-3p
YES
YES
YES
hsa-miR-23b-3p
YES
YES
YES
hsa-miR-376c-3p
YES
YES
NO
Display: