ctcRbase

Entry Detail

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General Information

Database ID: LUSC07671 Cancer Type: non-small cell lung cancer Dataset: GSE74639 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: INO80 Full Name: INO80 complex subunit Category: mRNA Synonyms: INO80A|INOC1 Chromosome: chr15 Strand: - Coordinate: Start Site(bp): 40978880 End Site(bp): 41116354 Gene Summary: This gene encodes a subunit of the chromatin remodeling complex, which is classified into subfamilies depending on sequence features apart from the conserved ATPase domain. This protein is the catalytic ATPase subunit of the INO80 chromatin remodeling complex, which is characterized by a DNA-binding domain. This protein is proposed to bind DNA and be recruited by the YY1 transcription factor to activate certain genes. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013] External Links: Ensembl ID: ENSG00000128908 HGNC ID: HGNC:26956 Entrez Gene: 54617

Expression Profile of INO80 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-1271-5p YES YES NO hsa-miR-129-2-3p YES NO YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES YES hsa-miR-136-5p YES YES YES hsa-miR-138-5p YES NO YES hsa-miR-145-5p YES YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-193a-3p YES NO YES hsa-miR-193b-3p YES NO YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-216b-5p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-27a-3p YES NO YES hsa-miR-27b-3p YES NO YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-340-5p YES YES YES hsa-miR-342-3p YES YES YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-370-3p YES YES NO hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-423-5p YES NO YES hsa-miR-425-5p YES YES NO hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-454-3p YES YES YES hsa-miR-483-3p YES NO YES hsa-miR-485-5p YES YES NO hsa-miR-493-3p YES NO YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-7-5p YES YES NO hsa-miR-93-5p YES YES YES hsa-miR-96-5p YES YES NO Display: