ctcRbase

Entry Detail

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General Information

Database ID: PAAD03151 Cancer Type: pancreatic cancer Dataset: GSE60407 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: RORB Full Name: RAR related orphan receptor B Category: mRNA Synonyms: NR1F2|ROR-BETA|RZR-BETA|RZRB|bA133M9.1 Chromosome: chr9 Strand: + Coordinate: Start Site(bp): 74497365 End Site(bp): 74693177 Gene Summary: The protein encoded by this gene is a member of the NR1 subfamily of nuclear hormone receptors. It is a DNA-binding protein that can bind as a monomer or as a homodimer to hormone response elements upstream of several genes to enhance the expression of those genes. The encoded protein has been shown to interact with NM23-2, a nucleoside diphosphate kinase involved in organogenesis and differentiation, and to help regulate the expression of some genes involved in circadian rhythm. [provided by RefSeq, Feb 2014] External Links: Ensembl ID: ENSG00000198963 HGNC ID: HGNC:10259 Entrez Gene: 6096

Expression Profile of RORB Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-130b-3p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-150-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-199a-3p YES NO YES hsa-miR-199a-5p YES YES YES hsa-miR-199b-3p YES NO YES hsa-miR-199b-5p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-219a-5p YES YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES NO YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-340-5p YES YES NO hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-376c-3p YES YES YES hsa-miR-409-3p YES NO YES hsa-miR-421 YES YES YES hsa-miR-433-3p YES YES NO hsa-miR-448 YES YES YES hsa-miR-495-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-542-3p YES YES NO hsa-miR-873-5p YES YES NO Display: