Entry Detail



General Information

Database ID:PRAD04238
Cancer Type:prostate cancer
Dataset:GSE104209
CTCs/CTM Isolation Method:CTC-iChip



Gene Information

ncRNA Symbol:HLA-DRB5
Full Name:major histocompatibility complex, class II, DR beta 5
Category:mRNA
Synonyms:-
Chromosome:chr6
Strand:-
Coordinate:
Start Site(bp):32517343End Site(bp):32530287
Gene Summary:HLA-DRB5 belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DRA) and a beta (DRB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. DRB1 is expressed at a level five times higher than its paralogues DRB3, DRB4 and DRB5. The presence of DRB5 is linked with allelic variants of DRB1, otherwise it is omitted. There are 4 related pseudogenes: DRB2, DRB6, DRB7, DRB8 and DRB9. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000198502
HGNC ID:HGNC:4953
Entrez Gene:3127



Expression Profile of HLA-DRB5 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-142-3p
YES
YES
NO
hsa-miR-326
YES
YES
NO
hsa-miR-330-5p
YES
YES
NO
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