ctcRbase

Entry Detail

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General Information

Database ID: PRAD04298 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: TSPAN9 Full Name: tetraspanin 9 Category: mRNA Synonyms: NET-5|NET5|PP1057 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 3077355 End Site(bp): 3286564 Gene Summary: The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. Alternatively spliced transcripts encoding the same protein have been identified. [provided by RefSeq, Nov 2009] External Links: Ensembl ID: ENSG00000011105 HGNC ID: HGNC:21640 Entrez Gene: 10867

Expression Profile of TSPAN9 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES NO YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 YES NO YES hsa-miR-10a-5p YES NO YES hsa-miR-10b-5p YES NO YES hsa-miR-1271-5p YES NO YES hsa-miR-1-3p YES YES YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-17-5p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-206 YES YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-339-5p YES NO YES hsa-miR-376a-3p YES YES NO hsa-miR-376b-3p YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-497-5p YES YES YES hsa-miR-519d-3p YES YES YES hsa-miR-613 YES YES YES hsa-miR-93-5p YES YES YES hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES NO YES Display: