ctcRbase

Entry Detail

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General Information

Database ID: PRAD05279 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: CHST15 Full Name: carbohydrate sulfotransferase 15 Category: mRNA Synonyms: BRAG|GALNAC4S-6ST Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 124007666 End Site(bp): 124093607 Gene Summary: Chondroitin sulfate (CS) is a glycosaminoglycan which is an important structural component of the extracellular matrix and which links to proteins to form proteoglycans. Chondroitin sulfate E (CS-E) is an isomer of chondroitin sulfate in which the C-4 and C-6 hydroxyl groups are sulfated. This gene encodes a type II transmembrane glycoprotein that acts as a sulfotransferase to transfer sulfate to the C-6 hydroxal group of chondroitin sulfate. This gene has also been identified as being co-expressed with RAG1 in B-cells and as potentially acting as a B-cell surface signaling receptor. Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2012] External Links: Ensembl ID: ENSG00000182022 HGNC ID: HGNC:18137 Entrez Gene: 51363

Expression Profile of CHST15 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-140-5p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-153-3p YES YES YES hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-217 YES YES NO hsa-miR-23a-3p YES NO YES hsa-miR-23b-3p YES NO YES hsa-miR-296-3p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-33a-5p YES YES NO hsa-miR-33b-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-448 YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-875-5p YES YES NO hsa-miR-9-5p YES YES NO Display: