ctcRbase

Entry Detail

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General Information

Database ID: PRAD05825 Cancer Type: prostate cancer Dataset: GSE104209 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: RUBCNL Full Name: RUN and cysteine rich domain containing beclin 1 interacting protein like Category: mRNA Synonyms: C13orf18|KIAA0226L|PACER Chromosome: chr13 Strand: - Coordinate: Start Site(bp): 46342000 End Site(bp): 46438190 Gene Summary: This gene encodes a cysteine-rich protein that contains a putative zinc-RING and/or ribbon domain. The encoded protein is related to Run domain Beclin-1-interacting and cysteine-rich domain-containing protein, which plays a role in endocytic trafficking and autophagy. In cervical cancer cell lines, this gene is expressed at low levels and may function as a tumor suppressor. Promoter hypermethylation of this gene is observed in cervical cancer cell lines and tissue derived from human patients. [provided by RefSeq, Mar 2017] External Links: Ensembl ID: ENSG00000102445 HGNC ID: HGNC:20420 Entrez Gene: 80183

Expression Profile of RUBCNL Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-132-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-212-3p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-503-5p YES YES YES hsa-miR-653-5p YES YES NO Display: